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Cibelella Coronata / Photo: Alexei Molchanov |

Sunday, 12 January 2025
GENAL SPINES A GO GO
Tuesday, 31 December 2024
BIOLUMINESCENCE: CHEMICAL POETRY
In the inky blackness of the deep sea, more than 90% of the animals are luminescent. It is quite a startling number but makes good sense when you think of the edge bioluminescence provides.
The ability to generate light helps umpteen animals find mates, attract prey and avoid predation. Handy stuff, light.
What you know about light above the surface does not hold true for the light you see as bioluminescence. Its energy and luminosity come from a chemical reaction.
In a luminescent reaction, two types of chemicals — luciferin and luciferase — combine together. Together, they produce cold light — light that generates less than 20% thermal radiation or heat.
The light you see is produced by a compound called Luciferin. It is the shiny, showy bit in this chemical show. Luciferase acts as an enzyme, the substance that acts as a catalyst controlling the rate of chemical reactions, allowing the luciferin to release energy as it is oxidized. The colour of the light depends on the chemical structures of the chemicals. There are more than a dozen known chemical luminescent systems, meaning that bioluminescence evolved independently in different groups of organisms.
Coelenterazine is the type of luciferin we find in shrimp, fish and jellyfish. Dinoflagellates and krill share another class of unique luciferins, while ostracods or firefleas and some fish have a completely different luciferin.
The luciferase found in dinoflagellates is related to the green chemical chlorophyll found in plants. Bioluminescent dinoflagellates are a type of plankton — teensy marine organisms that make the seaways shimmer like the Milky Way as you swim through them.
Their twinkling lights are brief, each containing about 100 million photons that shine for a tenth of a second. While each individual flicker is here and gone in the wink of an eye, en masse they are awe-inspiring. I have spent many wondrous evenings scuba diving amongst these glittering denizens off our shores.
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Cotylorhiza Tuberculata Jellyfish |
Bacteria and fireflies have unique luminescent chemistries. Fireflies light up when oxygen combines with calcium, adenosine triphosphate (ATP) and luciferin in the presence of luciferase.
For bacteria, the world stage of luminosity is quite small — and a bit gormless. Just how much light they emit and when is a free-for-all. Not so for the rest of our bioluminescent friends who have very precise control over when they shine and just how bright.
Bioluminescence comes in a variety of colours, from blue through red. The colour is based on the chemistry, which involves a substrate molecule called luciferin, the source of energy that goes into light, and an enzyme called luciferase or photoprotein.
In the ocean, bioluminescence is mostly blue-green or green. You would think that blues and green would not show up all that well in our seas but, surprisingly, they do. While sound travels better through saltwater than air, it is the reverse for light.
Various colours of light do not transmit equally through saltwater. Once we move deeper than the top layer of the ocean warmed by the sun and brimming with nutrients, the epipelagic zone, and move deeper through the mesopelagic, deeper and deeper still to the bathypelagic, frigid abyssalpelagic and finally the deep trenches of the icy pressure and all but inhospitable hadalpelagic, less and less light — until no light — gets through.
It is the twilight of the mesopelagic, 200 - 1000 metres below the surface, that is the sweet spot for most of our bioluminescent friends. Here, only very faint sunlight gets through. The water pressure is higher than at the surface but still lacks the crushing intensity of the lower zones. It is here that bioluminescence becomes a real advantage — good real estate and the showmanship of light pays gold.
We know that the deeper you go in our oceans, less and less sunlight gets through, so if the purpose of bioluminescence is to provide a signal that is noticed by prey, potential mates and predators alike, it is important that the light moves through the seawater, and not be absorbed or scattered — and this plays out in the colours evolved to be seen here.
If you have spent any time underwater, you will know that blue-green light transmits best through seawater. The deeper you go, the colours fade. Gone are the reds and yellows until everything looks brown or blue-green. Because of this, it is no surprise that blue-green is the most common colouring of bioluminescence in our oceans.
There are some exceptions to the blue-green/green colour rule — minuscule planktonic polychaete worms, Tomopteris helgolandica, emit yellow light, and deep-sea fish Malacosteus niger in the family Stomiidae, the barbeled dragonfishes, produce both red and blue.
Malacosteus niger's unique adaptation of producing red bioluminescence is only found in two other deep-sea dwelling creatures, Aristostomias and Pachystomias.
This rare form of bioluminescence can reach up to 700 nm in the deep-sea and cannot be perceived by green and blue bioluminescent organisms — granting M. niger a considerable advantage while hunting at depth.
The red light may function as an invisible searchlight of sorts because most animals in the ocean cannot see red light, while the eyes of M. niger are red-sensitive. It is much easier to find and eat something that cannot see you, particularly if it is lit up like a tasty red holiday snack.
Reference: https://latzlab.ucsd.edu/bioluminescence/
Sunday, 22 December 2024
ANCIENT ARAGONITE: FOSSIL PEARLS
A simple search will show you a vast array of pearls being used for their ornamental value in cultures from all over the world. I suppose the best answer to why they are appealing is just that they are.
If you make your way to Paris, France and happen to visit the Louvre's Persian Gallery, do take a boo at one of the oldest pearl necklaces in existence — the Susa necklace. It hails from a 2,400-year-old tomb of long lost Syrian Queen. It is a showy piece with three rows of 72 pearls per strand strung upon a bronze wire.
A queen who truly knew how to accessorize.
I imagine her putting the final touches of her outfit together, donning the pearls and making an entrance to wow the elite of ancient Damascus. The workmanship is superb, intermixing pure gold to offset the lustre of the pearls. It is precious and ancient, crafted one to two hundred years before Christ. Perhaps a gift from an Egyptian Pharaoh or from one of the Sumerians, Eblaites, Akkadians, Assyrians, Hittites, Hurrians, Mitanni, Amorites or Babylonian dignitaries who sued for peace but brought war instead.
Questions, good questions, but questions without answers. So, what can we say of pearls? We do know what they are and it is not glamorous. Pearls form in shelled molluscs when a wee bit of sand or some other irritant gets trapped inside the shell, injuring the flesh. As a defensive and self-healing tactic, the mollusc wraps it in layer upon layer of mother-of-pearl — that glorious shiny nacre that forms pearls.
They come in all shapes and sizes from minute to a massive 32 kilograms or 70 pounds. While a wide variety of our mollusc friends respond to injury or irritation by coating the offending intruder with nacre, there are only a few who make the truly gem-y pearls.These are the marine pearl oysters, Pteriidae and a few freshwater mussels. Aside from Pteriidae and freshwater mussels, we sometimes find less gem-y pearls inside conchs, scallops, clams, abalone, giant clams and large marine gastropods.
Pearls are made up mostly of the carbonate mineral aragonite, a polymorphous mineral — the same chemical formula but different crystal structure — to calcite and vaterite, sometimes called mu-calcium carbonate. These polymorphous carbonates are a bit like Mexican food where it is the same ingredients mixed in different ways. Visually, they are easy to tell apart — vaterite has a hexagonal crystal system, calcite is trigonal and aragonite is orthorhombic.
As pearls fossilize, the aragonite usually gets replaced by calcite, though sometimes by vaterite or another mineral. When we are very lucky, that aragonite is preserved with its nacreous lustre — that shimmery mother-of-pearl we know and love.
Molluscs have likely been making pearls since they first evolved 530 million years ago. The oldest known fossil pearls found to date, however, are 230-210 million years old.
This was the time when our world's landmass was concentrated into the C-shaped supercontinent of Pangaea and the first dinosaurs were calling it home. In the giant ancient ocean of Panthalassa, ecosystems were recovering from the high carbon dioxide levels that fueled the Permian extinction. Death begets life. With 95% of marine life wiped out, new species evolved to fill each niche.
While this is where we found the oldest pearl on record, I suspect we will one day find one much older and hopefully with its lovely great-great grandmother-of-pearl intact.
Friday, 15 November 2024
FOSSIL SITES OF THE OKANAGAN HIGHLANDS
Wednesday, 6 November 2024
LIVING FOSSILS: MASTERS OF MASS EXTINCTION EVENTS
Much like (slow) Water Striders (Aquarius remigis), (relatively sluggish) Coelacanth (Latimeria chalumnae) and (the current winner on really slow evolution) Elephant Sharks (Callorhinchus milii), these fellows have a long history in the fossil record with very few anatomical changes.
But slow change provides loads of great information. It makes our new friend, Yunnanolimulus luoingensis, an especially interesting and excellent reference point for how this group evolved.
We can examine their genome today and make comparisons all the way back to the Middle Triassic (with this new find) and other specimens from further back in the Ordovician — 445 million years ago.
These living fossils have survived all five mass extinction events. They are generalists who can live in shallow or deep water and will eat pretty much anything they can find on the seafloor.
The oldest horseshoe crab fossil, Lunataspis aurora, is found in outcrops in Manitoba, Canada. Charmingly, the name means crescent moon shield of the dawn. It was palaeontologist Dave Rudkin and team who chose that romantic name. Finding them as fossils is quite remarkable as their shells are made of protein which does not mineralized like typical fossils.
Even so, the evolution of their exoskeleton is well-documented by fossils, but appendage and soft-tissue preservation are extremely rare.
A new study analyzes details of the appendage and soft-tissue preservation in Yunnanolimulus luoingensis, a Middle Triassic (ca. 244 million years old) horseshoe crab from Yunnan Province, SW China. The remarkable anatomical preservation includes the chelicerae, five pairs of walking appendages, opisthosomal appendages with book gills, muscles, and fine setae permits comparison with extant horseshoe crabs.
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The occurrence of Carcinoscorpius-type claspers on the first and second walking legs in male individuals of Y. luoingensis tells us that simple chelate claspers in males are plesiomorphic for horseshoe crabs, and the bulbous claspers in Tachypleus and Limulus are derived.
As an aside, if you hadn't seen an elephant shark before and were shown a photo, you would likely say, "that's no freaking shark." You would be wrong, of course, but it would be a very clever observation.
Callorhinchus milii look nothing like our Great White friends and they are not true sharks at all. Rather, they are ghost sharks that belong to the subclass Holocephali (chimaera), a group lovingly known as ratfish. They diverged from the shark lineage about 400 million years ago.
If you have a moment, do a search for Callorhinchus milii. The odd-looking fellow with the ironic name, kallos, which means beautiful in Greek, sports black blotches on a pale silver elongate body. And their special feature? It is the fishy equivalent of business in the front, party in the back, with a dangling trunk-like projection at the tip of their snout and well-developed rectal glands near the tail.
As another small point of interest with regards to horseshoe crabs, John McAllister collected several of these while working on his MSc to see if they had microstructures similar to trilobites (they do) and whether their cuticles were likewise calcified. He found no real calcification in their cuticles, in fact, he had a rather frustrating time getting anything measurable to dissolve in acid in his hunt for trace elements.
Likewise, when looking at oxygen isotopes (16/18) to get a handle on water salinity and temperature, his contacts at the University of Waterloo had tons of fun getting anything at all to analyze. It made for some interesting findings. Sadly, for a number of reasons, he abandoned the work, but you can read his very interesting thesis here: https://dr.library.brocku.ca/handle/10464/1959
Ref: Hu, Shixue & Zhang, Qiyue & Feldmann, Rodney & Benton, Michael & Schweitzer, Carrie & Huang, Jinyuan & Wen, Wen & Zhou, Changyong & Xie, Tao & Lü, Tao & Hong, Shuigen. (2017). Exceptional appendage and soft-tissue preservation in a Middle Triassic horseshoe crab from SW China. Scientific Reports. 7. 10.1038/s41598-017-13319-x.
Monday, 28 October 2024
SMILODON NORTH OF THE 49TH PARALLEL
Smilodon is a genus of the extinct machairodont subfamily of the felids. It is one of the most famous prehistoric mammals and the best known saber-toothed cat. Although commonly known as the saber-toothed tiger, it was not closely related to the tiger or other modern cats.
Up until a few years ago, all the great fossil specimens of this apex predator were found south of us in the United States. That was until some interesting bones from Medicine Hat, Alberta got a second look.
A few years ago, a fossil specimen caught the eye of researcher Ashley Reynolds as she was rummaging through the collections at the Royal Ontario Museum in Toronto.
Back in the 1960s, University of Toronto palaeontologist C.S. Churcher and his team had collected and donated more than 1,200 specimens from their many field seasons scouring the bluffs of the South Saskatchewan River near Medicine Hat, Alberta.
Churcher is a delightful storyteller and a palaeontologist with a keen eye. I had the very great pleasure of listening to many of his talks out at the University of British Columbia and a few Vancouver Paleontological Society meetings in the mid-2000s.
"Rufus" was a thoroughly charming storyteller and shared many of his adventures from the field.
He moved out to the West Coast for his retirement, first to Gabriola Island then to Victoria, but his keen love of the science kept him giving talks to enthralled listeners keen to hear about his survey of the Dakhleh Oasis in the Western Desert of Egypt, geomorphology, stratigraphy, recent biology, Pleistocene and Holocene lithic cultures, insights learned from Neolithic Islamic pottery to Roman settlements.
The specimens he had collected had been roughly sorted but never examined in detail. Reynolds, who was researching the growth patterns and life histories of extinct cats saw a familiar-looking bone from an ancient cat's right front paw. That tiny paw bone had reached through time and was positively identified as Canada's first Smilodon.
These Apex Predators used their exceptionally long upper canine teeth to hunt large mammals.
Isotopes preserved in the bones of S. fatalis in the La Brea Tar Pits in California tell us that they liked to dine on bison (Bison antiquus) and camels (Camelops) along with deer and tapirs. Smilodon is thought to have killed its prey by holding it still with its forelimbs and biting it. And that was quite the bite!
Their razor-sharp incisors were arranged in an arch. Once they bit down, the teeth would hold their prey still and stabilize it while the canine bite was delivered — and what a bite that was. They could open their mouths a full 120 degrees.
Smilodon died out at the same time that most North and South American megafauna disappeared, about 10,000 years ago. Its reliance on large animals has been proposed as the cause of its extinction, along with climate change and competition with other species.
Thursday, 24 October 2024
BRONZE BEAUTY: EIFELIAN PARALEJURUS
It was the colour of this amazing trilobite that captured the eye of David Appleton in whose collection it now resides. He is an avid collector and coming into his own as a macro photographer. I have shared three of his delightful photos for you here.
It initially thought that the gold we see here was added during prep, particularly considering the colouration of the matrix, but macro views of the surface show mineralization and the veins running right through the specimen into the matrix. There is certainly some repairs but that is common in the restoration of these specimens. Many of the trilobites I have seen from Morocco have bronze on black colouring but not usually this pronounced. Even so, there is a tremendous amount of fine anatomy to explore and enjoy in this wonderfully preserved specimen.
Paralejurus is a genus of trilobite in the phylum Arthropoda from the Late Silurian to the Middle Devonian of Africa and Europe. These lovelies grew to be up to nine centimetres, though the fellow you see here is a wee bit over half that size at 5.3 cm.
Paralejurus specimens are very pleasing to the eye with their long, oval outline and arched exoskeletons.
Their cephalon or head is a domed half circle with a smooth surface. The large facet eyes have very pleasing crescent-shaped lids. You can see this rather well in the first of the photos here. The detail is quite remarkable.
As you move down from his head towards the body, there is an almost inconspicuous occipital bone behind the glabella in the transition to his burnt bronze thorax.
The body or thorax has ten narrow segments with a clearly arched and broad axial lobe or rhachis. The pygidium is broad, smooth and strongly fused in contrast to the genus Scutellum in the family Styginidae, which has a pygidium with very attractive distinct furrows that I liken to the look of icing ridges on something sweet — though that may just be me and my sweet tooth talking. In Paralejurus, they look distinctly fused — or able to fuse — to add posterior protection against predators with both the look and function of Roman armour.
In Paralejurus, the axillary lobe is rounded off and arched upwards. It is here that twelve to fourteen fine furrows extend radially to complete the poetry of his body design.
Trilobites were amongst the earliest fossils with hard skeletons and they come in many beautiful forms. While they are extinct today, they were the dominant life form at the beginning of the Cambrian.As a whole, they were amongst some of the most successful of all early animals — thriving and diversifying in our ancient oceans for almost 300 million years. The last of their brethren disappeared at the end of the Permian — 252 million years ago. Now, we enjoy their beauty and the scientific mysteries they reveal about our Earth's ancient history.
Photos and collection of the deeply awesome David Appleton. Specimen: 5.3 cm.
Sunday, 20 October 2024
ALCIDS AUKS: PUFFLINGS AND DUTIFUL PARENTS
Their sexy orange beaks shift from a dull grey to bright orange when it is time to attract a mate. While not strictly monogamous, most Puffins choose the same mate year upon year producing adorable chicks or pufflings (awe) from their mating efforts.
Female Puffins produce one single white egg which the parents take turns to incubate over a course of about six weeks. Their dutiful parents share the honour of feeding the wee pufflings five to eight times a day until the chick is ready to fly. Towards the end of July, the fledgeling Puffins begin to venture from the safety of their parents and dry land. Once they take to the seas, mom and dad are released from duty and the newest members of the colony are left to hunt and survive on their own.
These are pelagic seabirds that feed primarily by diving in the water. They breed in large colonies on coastal cliffs or offshore islands, nesting in crevices among rocks or in burrows in the soil. Two species, the tufted puffin and horned puffin are found in the North Pacific Ocean, while the Atlantic puffin is found in the North Atlantic Ocean.
These Atlantic Puffins are one of the most famous of all the seabirds and form the largest colony in Southern Britain. They live about 25 years making a living in our cold seas dining on herring, hake and sand eels. Some have been known to live to almost 40 years of age. They are good little swimmers as you might expect, but surprisingly they are great flyers, too! They are hindered by short wings, which makes flight challenging but still possible with effort. Once they get some speed on board, they can fly up to 88 km an hour.
The oldest alcid fossil is Hydrotherikornis from Oregon dating to the Late Eocene while fossils of Aethia and Uria go back to the Late Miocene. Molecular clocks have been used to suggest an origin in the Pacific in the Paleocene. Fossils from North Carolina were originally thought to have been of two Fratercula species but were later reassigned to one Fratercula, the tufted puffin, and a Cerorhinca species. Another extinct species, Dow's puffin, Fratercula dowi, was found on the Channel Islands of California until the Late Pleistocene or early Holocene.
The Fraterculini are thought to have originated in the Pacific primarily because of their greater diversity in the region. There is only one extant species in the Atlantic, compared to two in the Pacific. The Fraterculini fossil record in the Pacific extends at least as far back as the middle Miocene, with three fossil species of Cerorhinca, and material tentatively referred to that genus, in the middle Miocene to late Pliocene of southern California and northern Mexico.
Although there no records from the Miocene in the Atlantic, a re-examination of the North Carolina material indicated that the diversity of puffins in the early Pliocene was as great in the Atlantic as it is in the Pacific today. This diversity was achieved through influxes of puffins from the Pacific; the later loss of species was due to major oceanographic changes in the late Pliocene due to closure of the Panamanian Seaway and the onset of severe glacial cycles in the North Atlantic.
Wednesday, 16 October 2024
NEVADA: AMMONOIDS AND CONODONTS
Exposures of the Upper Triassic, Early Norian, Kerri zone, Luning formation, West Union Canyon, just outside Berlin-Ichthyosaur State Park, Nevada.
The Berlin-Ichthyosaur State Park in central Nevada is a very important locality for the understanding of the Carnian-Norian boundary (CNB) in North America.
Rich ammonoid faunas from this site within the Luning Formation were studied by Silberling (1959) and provided support for the definition of the Schucherti and Macrolobatus zones of the latest Carnian, which are here overlain by well-preserved faunas of the earliest Norian Kerri Zone. Despite its importance, no further investigations have been done at this site during the last 50 years.
Jim Haggart, Mike Orchard and Paul Smith collaborated on a project that took them down to Nevada to look at the conodonts and ammonoids; the group then published a paper, "Towards the definition of the Carnian/Norian Boundary: New data on Ammonoids and Conodonts from central Nevada," which you can find in the proceedings of the 21st Canadian Paleontology Conference; by Haggart, J W (ed.); Smith, P L (ed.); Canadian Paleontology Conference Proceedings no. 9, 2011 p. 9-10.
They conducted a bed-by-bed sampling of ammonoids and conodonts in West Union Canyon during October 2010. The eastern side of the canyon provides the best record of the Macrolobatus Zone, which is represented by several beds yielding ammonoids of the Tropites group, together with Anatropites div. sp. conodont faunas from both these and higher beds are dominated by ornate 'metapolygnthids' that would formerly have been collectively referred to Metapolygnathus primitius, a species long known to straddle the CNB. Within this lower part of the section, they resemble forms that have been separated as Metapolygnathus mersinensis. Slightly higher, forms close to 'Epigondolella' orchardi and a single 'Orchardella' n. sp. occur. This association can be correlated with the latest Carnian in British Columbia.
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Ammonoids of the Luning Formation |
The best exposure of the Kerri Zone is on the western side of the West Union Canyon. Ammonoids, dominated by Guembelites and Stikinoceras div. sp., have been collected from several fossil-bearing levels. Conodont faunas replicate those of the east section. The collected ammonoids fit perfectly well with the faunas described by Silberling in 1959, but they differ somewhat from the coeval faunas of the Tethys and Canada.
The genus Gonionotites, very common in the Tethys and British Columbia, is for the moment unknown in Nevada. More in general, the Upper Carnian faunas are dominated by Tropitidae, while Juvavitidae are lacking.
After years of reading about the correlation between British Columbia and Nevada, I had the very great pleasure of walking through these same sections in October 2019 with members of the Vancouver Paleontological Society and Vancouver Island Palaeontological Society. It was with that same crew that I had originally explored fossil sites in the Canadian Rockies in the early 2000s. Those early trips led to paper after paper and the exciting revelations that inspired our Nevada adventure.
Saturday, 12 October 2024
NATURAL DYES: INDIGO
Archaeologists have found evidence of textile dyeing dating back to the Neolithic period.
The essential process of dyeing changed little over time. Typically, the dye material is put in a pot of water and then the textiles to be dyed are added to the pot, which is heated and stirred until the colour is transferred. Sometimes, we use workers with stout marching legs to mix this up.
Traditional dye works still operate in many parts of the world. There is a revival of using natural indigo in modern Egypt — although their indigo dye is mostly imported. The same is true further south in Sudan. They've been importing cloth from Upper Egypt as far back as we have written records and continue the practice of the cloth and dye imports today. Clean white cotton is more the style of western Sudan and Chad, but they still like to throw in a bit of colour.
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Traditional Dye Vats |
My guide took me to the top of a building so I could look down on rows and rows of coloured vats. In every other one was a man marching in place to work the dye into the wool. Their legs took on the colour from their daily march in place in huge tubs of liquid dye and sheared wool.
Many natural dyes require the use of chemicals called mordants to bind the dye to the textile fibres; tannin from oak galls, salt, natural alum, vinegar, and ammonia from stale urine were staples of the early dyers.
Many mordants and some dyes themselves produce strong odours. Urine is a bit stinky. Not surprisingly, large-scale dyeworks were often isolated in their own districts.
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Woad, Isatis tinctoria |
Dyes such as cochineal and logwood, Haematoxylum campechianum, were brought to Europe by the Spanish treasure fleets, and the dyestuffs of Europe were carried by colonists to America.
Throughout history, people have dyed their textiles using common, locally available materials, but scarce dyestuffs that produced brilliant and permanent colours such as the natural invertebrate dyes. Crimson kermes became highly prized luxury items in the ancient and medieval world. Red, yellow and orange shades were fairly easy to procure as they exist as common colourants of plants. It was blue that people sought most of all and purple even more so.
Indigofera tinctoria, a member of the legume or bean family proved just the trick. This lovely plant — named by the famous Swedish botanist Carl Linneaus, the father of formalized binomial nomenclature — grows in tropical to temperate Asia and subtropical regions, including parts of Africa.
The plants contain the glycoside indican, a molecule that contains a nitrogenous indoxyl molecule with some glucose playing piggyback.
To make the lovely blue and purple dyes, we harvest the plants and ferment them in vats with urine and ash. The fermentation splits off the glucose, a wee bit of oxygen mixes in with the air (with those sturdy legs helping) and we get indigotin — the happy luxury dye of royalty, emperors and kings.
While much of our early dye came from plants — now it is mostly synthesized — other critters played a role. Members of the large and varied taxonomic family of predatory sea snails, marine gastropod mollusks, commonly known as murex snails were harvested by the Phoenicians for the vivid dye known as Tyrian purple.
While the extant specimens maintained their royal lineage for quite some time; at least until we were able to manufacture synthetic dyes, it was their fossil brethren that first captured my attention. There are about 1,200 fossil species in the family Muricidae.
George E. Radwin and Anthony D'Attilio: The Murex shells of the World, Stanford University press, 1976, ISBN 0-8047-0897-5
Pappalardo P., Rodríguez-Serrano E. & Fernández M. (2014). "Correlated Evolution between Mode of Larval Development and Habitat in Muricid Gastropods". PLoS ONE 9(4): e94104. doi:10.1371/journal.pone.0094104
Miocene Gastropods and Biostratigraphy of the Kern River Area, California; United States Geological Survey Professional Paper 642
Friday, 11 October 2024
TIKTAALIK: FOSSIL FISHAPODS
Qikiqtania wakei, a fishapod & relative to tetrapods |
Up to that point, the relationship of limbed vertebrates (tetrapods) to lobe-finned fish (sarcopterygians) was well known, but the origin of significant tetrapod features remained obscure for the lack of fossils that document the sequence of evolutionary changes — until Tiktaalik.
While Tiktaalik is technically a fish, this fellow is as far from fish-like as you can be and still be a card-carrying member of the group.
Interestingly, while Neil Shubin and crew were combing the icy tundra for Tiktaalik, another group was trying their luck just a few kilometres away.
A week before the eureka moment of Tiktaalik's discovery, Tom Stewart and Justin Lemberg unearthed material that we now know to be a relative of Tiktaalik's.
Meet Qikiqtania wakei, a fishapod and close relative to our dear tetrapods — and cousin to Tiktaalik — who shares features in the flattened triangular skull, shoulders and elbows in the fin.
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Qikiqtania (pronounced kick-kick-TAN-ee-ya) |
The story gets wilder when we look at Qikiqtania’s position on the evolutionary tree— all the features for this type of swimming are newly evolved, not primitive.
This means that Qikiqtania secondarily reentered open water habitats from ancestors that had already had some aspect of walking behaviour.
And, this whole story was playing out 365 million years ago — the transition from water to land was going both ways in the Devonian.
Why is this exciting? You and I descend from those early tetrapods. We share the legacy of their water-to-land transition and the wee bony bits in their wrists and paddles that evolved to become our hands. I know, mindblowing!
Thomas Stewart and Justin Lemberg put in thousands of hours bringing Qikiqtania to life.
The analysis consisted of a long path of wild events— from a haphazard moment when it was first spotted, a random collection of a block that ended up containing an articulated fin, to a serendipitous discovery three days before Covid lockdowns in March 2020.
Both teams acknowledge the profound debt owed to the individuals, organizations and indigenous communities where they had the privilege to work — Grise Fiord and Resolute Bay— Ellesmere Island in Nunavut, the largest and northernmost territory of Canada.
Part of that debt is honoured in the name chosen for this new miraculous species.
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Aerial View of Ellesmere Island |
The specific name, wakei, is in memory of the evolutionary biologist David Wake — colleague, mentor and friend.
He was a professor of integrative biology and Director and curator of herpetology at the Museum of Vertebrate Zoology at the University of California, Berkeley who passed away in April 2021.
Wake is known for his work on the biology and evolution of salamanders and vertebrate evolutionary biology.
If you look at the photo on the left you can imagine visiting these fossil localities in Canada's far north.
Qikiqtania was found on Inuit land and belongs to the community. Thomas Stewart and his colleagues were able to conduct this research because of the generosity and support of individuals in the hamlets of Resolute Bay and Grise Fiord, the Iviq Hunters and Trappers of Grise Fiord, and the Department of Heritage and Culture, Nunavut.
To them, on behalf of the larger scientific community — Nakurmiik. Thank you!
Here is the link to Tom Stewart's article in The Conversation & paper in Nature that dropped yesterday:
- Stewart, Thomas A.; Lemberg, Justin B.; Daly, Ailis; Daeschler, Edward B.; Shubin, Neil H. (2022-07-20). "A new elpistostegalian from the Late Devonian of the Canadian Arctic". Nature. doi:10.1038/s41586-022-04990-w. ISSN 0028-0836.
- Stewart, Thomas. "Meet Qikiqtania, a fossil fish with the good sense to stay in the water while others ventured onto land" The Conversation. Retrieved 2022-07-20.
Image One: An artist’s vision of Qikiqtania enjoying its fully aquatic, free-swimming lifestyle. Alex Boersma, CC BY-ND
Image Two: A new elpistostegalian from the Late Devonian of the Canadian Arctic, T. A. Stewart, J. B. Lemberg, A. Daly, E. B. Daeschler, & N. H. Shubin.
A huge shout out to the deeply awesome Neil Shubin who shared that the paper had been published and offered his insights on what played out behind the scenes!
Friday, 4 October 2024
FOSSILS, LIMESTONE AND SALT: HALLSTATT
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Hallstatt Salt Mines, Austria / Permian Salt Diapir |
Along with diversified cephalopod fauna — orthoceratids, nautiloids, ammonoids — we also see gastropods, bivalves, especially the late Triassic pteriid bivalve Halobia (the halobiids), brachiopods, crinoids and a few corals. We also see a lovely selection of microfauna represented.
Parts of the massif also lie in the state of Salzburg, leading to the mountain being referred to as the Drei-Länder-Berg or three-state mountain. Seen from the north, the Dachstein massif is dominated by the glaciers with the rocky summits rising beyond them. By contrast, to the south, the mountain drops almost vertically to the valley floor. The karst limestones and dolomites were deposited in our Mesozoic seas. The geology of the Dachstein massif is dominated by the Dachstein-Kalk Formation — the Dachstein limestone — which dates back to the Triassic.
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Hallstatt and the Hallstatt Sea, Austria |
The Hallstatt mine exploits a Permian salt diapir that makes up some of this area’s oldest rock.
The Hallstatt-Meliata Ocean was one such back-arc basin. As it continued to expand and deepen during the Triassic, evaporation ceased and reefs flourished; thick limestone deposits accumulated atop the salt. When the Hallstatt-Meliata Ocean closed in the Late Jurassic, the compression squeezed the low-density salt into a diapir that rose buoyantly, injecting itself into the Triassic limestones above.
The Hallstatt salt diapir and its overlying limestone cap came to rest in their present position in the northern Austrian Alps when they were shoved northward as nappes (thrust sheets) during two separate collision events, one in the Cretaceous and one in the Eocene, that created the modern Alps. It is from the Hallstatt salt diapir that Hallstatt, like so many cities and towns, gets its name.
Deposits of rock salt or halite, the mineral name of sodium chloride with the chemical formula of NaCl, are found and mined around the globe. These deposits mark the dried remains of ancient oceans and seas. Names of rivers, towns and cities in Europe — Salzburg, Halle, Hallstatt, Hallein, La Salle, Moselle — all pay homage to their connection to halite and salt production. The Greek word for salt is hals and the Latin is sal. The Turkish name for salt is Tuz, which we see in the naming of Tuzla, a salt-producing region of northeastern Bosnia-Herzegovina and in the names of towns that dot the coast of Turkey where it meets the Black Sea. Hallstatt with its salt diapir is no exception.
Space is at a minimum in the town. For centuries, every ten years the local cemetery exhumes the bones of those buried there and moves them to an ossuary to make room for new burials. The Hallstatt Ossuary is called Karner, Charnel House, or simply Beinhaus (Bone House). Karners are places of secondary burials. They were once common in the Eastern Alps, but that custom has largely disappeared.
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Hallstatt Beinhaus Ossuary, Hallstatt, Austria |
Each is inscribed and attached to a record with the deceased's name, profession and date of death. The Bone House is located in a chapel in the basement of the Church of Saint Michael. The church dates from the 12th century CE.
The region is habitat to a variety of diverse flora and fauna, including many rare species such as native orchids, in the wetlands and moors in the south and north.
Linked by road to the cities of Salzburg and Graz, Hallstatt and its lake were declared one of the World Heritage sites in Austria in 1997 and included in the Hallstatt-Dachstein Salzkammergut Alpine UNESCO World Heritage Site. The little market village of Hallstatt takes its name from the local salt mine.
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Hallstatt, Salzkammergut region, Austria |
Above the town are the Hallstatt Salt mines located within the 1,030-meter-tall Salzburg Salt Mountain. They are accessible by cable car or a three-minute journey aboard the funicular railway. There is also a wonderful Subterranean Salt Lake.
In 1734, there was a corpse found here preserved in salt. The fellow became known as the Man in Salt. Though no archaeological analysis was performed at the time — the mummy was respectfully reburied in the Hallstatt cemetery — based on descriptions in the mine records, archaeologists suspect the miner lived during the Iron Age. This Old Father, Senos ph₂tḗr, 'ɸatīr 'father' may have been a local farmer, metal-worker, or both and chatted with his friends and family in Celtic or Proto-Celtic.
Salt mining in the area dates back to the Neolithic period, from the 8th to 5th Centuries BC. This is around the time that Roman legions were withdrawing from Britain and the Goths sacked Rome. In Austria, agricultural settlements were dotting the landscape and the alpine regions were being explored and settled for their easy access to valuable salt, chert and other raw materials.
The salt-rich mountains of Salzkammergut and the upland valley above Hallstatt were attractive for this reason. The area was once home to the Hallstatt culture, an archaeological group linked to Proto-Celtic and early Celtic people of the Early Iron Age in Europe, c.800–450 BC.
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Bronze Age vessel with cow and calf |
In the 19th century, a burial site was discovered with 2,000 individuals, many of them buried with Bronze Age artefacts of amber and ivory.
It was this find that helped lend the name Hallstatt to this epoch of human history. The Late Iron Age, between around 800 and 400 BC, became known as the Hallstatt Period.
For its rich history, natural beauty and breathtaking mountainous geology, Hallstatt is a truly irresistible corner of the world.
Salzbergstraße 1, 4830 Hallstatt. https://www.salzwelten.at/en/home/
Photo: Bronze vessel with cow and calf, Hallstatt by Alice Schumacher - Naturhistorisches Museum Wien - A. Kern – K. Kowarik – A. W. Rausch – H. Reschreiter, Salz-Reich. 7000 Jahre Hallstatt, VPA 2 (Wien, 2008) Seite 133 Abbildung 6. Hallstatt Village & Ossuary Photos: P. McClure Photography ca. 2015.
Bernoulli D, Jenkyns HC (1974) Alpine, Mediterranean, and Central Atlantic Mesozoic facies in relation to the early evolution of the Tethys. Soc Econ Paleont Mineral Spec Publ 19:129–160
Bernoulli D, Jenkyns H (2009) Ancient oceans and continental margins of the Alpine-Mediterranean Tethys: deciphering clues from Mesozoic pelagic sediments and ophiolites. Sedimentology 56:149–190
Tuesday, 1 October 2024
CANADA'S GREAT BEARS
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Kermode or Spirit Bear, Ursus americanus kermodei |
Saturday, 28 September 2024
FRACTAL BUILDING: AMMONITES
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Argonauticeras besairei, Collection of José Juárez Ruiz. |
Ammonites were predatory, squid-like creatures that lived inside coil-shaped shells.
Like other cephalopods, ammonites had sharp, beak-like jaws inside a ring of squid-like tentacles that extended from their shells. They used these tentacles to snare prey, — plankton, vegetation, fish and crustaceans — similar to the way a squid or octopus hunt today.
Catching a fish with your hands is no easy feat, as I'm sure you know. But the Ammonites were skilled and successful hunters. They caught their prey while swimming and floating in the water column. Within their shells, they had a number of chambers, called septa, filled with gas or fluid that were interconnected by a wee air tube. By pushing air in or out, they were able to control their buoyancy in the water column.
They lived in the last chamber of their shells, continuously building new shell material as they grew. As each new chamber was added, the squid-like body of the ammonite would move down to occupy the final outside chamber.
They were a group of extinct marine mollusc animals in the subclass Ammonoidea of the class Cephalopoda. These molluscs, commonly referred to as ammonites, are more closely related to living coleoids — octopuses, squid, and cuttlefish) than they are to shelled nautiloids such as the living Nautilus species.
The Ammonoidea can be divided into six orders:
- Agoniatitida, Lower Devonian - Middle Devonian
- Clymeniida, Upper Devonian
- Goniatitida, Middle Devonian - Upper Permian
- Prolecanitida, Upper Devonian - Upper Triassic
- Ceratitida, Upper Permian - Upper Triassic
- Ammonitida, Lower Jurassic - Upper Cretaceous
If they are ceratitic with lobes that have subdivided tips; giving them a saw-toothed appearance and rounded undivided saddles, they are likely Triassic. For some lovely Triassic ammonites, take a look at the specimens that come out of Hallstatt, Austria and from the outcrops in the Humboldt Mountains of Nevada.
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Hoplites bennettiana (Sowby, 1826). |
One of my favourite Cretaceous ammonites is the ammonite, Hoplites bennettiana (Sowby, 1826). This beauty is from Albian deposits near Carrière de Courcelles, Villemoyenne, near la région de Troyes (Aube) Champagne in northeastern France.
At the time that this fellow was swimming in our oceans, ankylosaurs were strolling about Mongolia and stomping through the foliage in Utah, Kansas and Texas. Bony fish were swimming over what would become the strata making up Canada, the Czech Republic and Australia. Cartilaginous fish were prowling the western interior seaway of North America and a strange extinct herbivorous mammal, Eobaatar, was snuffling through Mongolia, Spain and England.
In some classifications, these are left as suborders, included in only three orders: Goniatitida, Ceratitida, and Ammonitida. Once you get to know them, ammonites in their various shapes and suturing patterns make it much easier to date an ammonite and the rock formation where is was found at a glance.
Ammonites first appeared about 240 million years ago, though they descended from straight-shelled cephalopods called bacrites that date back to the Devonian, about 415 million years ago, and the last species vanished in the Cretaceous–Paleogene extinction event.
They were prolific breeders that evolved rapidly. If you could cast a fishing line into our ancient seas, it is likely that you would hook an ammonite, not a fish. They were prolific back in the day, living (and sometimes dying) in schools in oceans around the globe. We find ammonite fossils (and plenty of them) in sedimentary rock from all over the world.
In some cases, we find rock beds where we can see evidence of a new species that evolved, lived and died out in such a short time span that we can walk through time, following the course of evolution using ammonites as a window into the past.
For this reason, they make excellent index fossils. An index fossil is a species that allows us to link a particular rock formation, layered in time with a particular species or genus found there. Generally, deeper is older, so we use the sedimentary layers rock to match up to specific geologic time periods, rather the way we use tree-rings to date trees. A handy way to compare fossils and date strata across the globe.
https://www.nature.com/articles/srep33689?fbclid=IwAR1BhBrDqhv8LDjqF60EXdfLR7wPE4zDivwGORTUEgCd2GghD5W7KOfg6Co#citeas
Photo: Hoplites Bennettiana from near Troyes, France. Collection de Christophe Marot